Ultrafiltration vs Nanofiltration

When does each make sense for protein, peptide, and small-molecule separation?

At a glance

Ultrafiltration

Scope1-100 kDa MWCO
CAPEX$100k-$600k
Best forProtein concentration & buffer exchange
vs

Nanofiltration

Scope200-1000 Da
CAPEX$150k-$800k
Best forSalt/sugar separation, desalting

Decision criteria

CriterionUltrafiltrationNanofiltrationVerdict
Separation principleProtein concentration & buffer exchangeSalt/sugar separation, desaltingSize cutoff range
Throughput / scale100-50,000 L/hr100-20,000 L/hrUF slightly higher
Capital cost$100k-$600k$150k-$800kUF lower
Operating costLow (~$0.5-2/m3)Moderate (higher TMP)UF cheaper
Product purity ceilingProtein 95-99% recoverySalt/sugar 90-99%Application-dependent

Quick verdict

UF and NF differ by an order of magnitude in cutoff. Pick by what you want to retain: proteins go in UF, salts and sugars get separated by NF.

Rule of thumb: If your target is >1 kDa, you probably want UF. If it's <1 kDa and you need to separate it from something even smaller, NF.

Frequently Asked Questions

When should I choose Ultrafiltration over Nanofiltration?

Use UF (1-100 kDa MWCO) for protein concentration and buffer exchange, or for retaining macromolecules while letting small solutes pass.

When should I choose Nanofiltration over Ultrafiltration?

Use NF (200-1000 Da) for separating salts from sugars, demineralizing fermentation broths, or recovering small charged molecules.

Can these two techniques be used together?

Yes — UF first to remove proteins, then NF to demineralise the filtrate. This sequence appears in lactic acid and amino acid production trains.

Which has lower OPEX at scale?

UF has lower TMP (1-3 bar vs 5-25 bar for NF) so pumping energy is much smaller, but NF can avoid a downstream evaporation step in dilute streams.

Read more on each technique

Try both in your flowsheet

Build a process with each option side by side and compare yield, purity, and cost.

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